Dear everyone, We have a shotgun metagenomic project. Now, we have a contig file in fasta format. These contigs were assembled from paired-end reads (Illumina Hiseq2500) with 700 bp of minimum length. Our project aims to analyse the classification and functional gene diversity. What should I do for next step? Thanks for your help!
Please see the tools in the group "Metagenomic Analysis". Documentation is on each tool's form including links to the underlying tool manuals.
I want to let you know that there are some server issues currently at http://usegalaxy.org. The suggestion is to wait until this issue is cleared before executing jobs at this server. Follow other recent Biostar posts concerning job failures for updates. For example: Problem uploading data
Related to: Organism names after Megablast?
Thanks, Jen, Galaxy team