Is there any guideline on how to setup an instance of Galaxy running on a cluster that uses SLURM as the workload manager? Since I'm a newbie in Linux administration there are many things that are not clear from the Galaxy project website; I feel some steps are omitted, or I'm not getting a clear picture.
This is what I've done so far:
- Installed the latest version of Galaxy pulled from Github. This installation is on the head node
- Installed and setup MySQL to work with Galaxy
- Installed drmaa-python library to connect Galaxy and SLURM
From this point on I'm stuck and I don't know how Galaxy can make use of the cluster. I have a dedicated partition for use by Galaxy jobs. Please advise.
BTW: Our OS is Centos 6.5