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Question: Cannot upload files (error)
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gravatar for vebaev
3.2 years ago by
vebaev • 130
vebaev • 130 wrote:

I got an error when trying to upload local file:

​Traceback (most recent call last):
  File "/galaxy-central/tools/data_source/upload.py", line 414, in <module>
    __main__()
  File "/galaxy-central/tools/data_source/upload.py", line 403, in __main__
    add_file( dataset, registry, json_file, output_path )
  File "/galaxy-central/tools/data_source/upload.py", line 118, in add_file
    type_info = Binary.is_sniffable_binary( dataset.path )
  File "/galaxy-central/lib/galaxy/datatypes/binary.py", line 55, in is_sniffable_binary
    format_instance = format[ "class" ]()
  File "/shed_tools/testtoolshed.g2.bx.psu.edu/repos/crusoe/oxli_datatypes/08a714ff4ea5/oxli_datatypes/oxli.py", line 35, in __init__
    OxliBinary.__init__(self, **kwd)
TypeError: unbound method __init__() must be called with OxliBinary instance as first argument (got Count instance instead)
upload files • 771 views
ADD COMMENT • link •
modified 3.2 years ago by Dannon Baker ♦ 3.7k • written 3.2 years ago by vebaev • 130
0
gravatar for Dannon Baker
3.2 years ago by
Dannon Baker ♦ 3.7k
United States
Dannon Baker ♦ 3.7k wrote:

Hi Manekineko,

Did you happen to update your Galaxy install recently?  These datatypes were added to the core distribution in a slightly altered form and I'm wondering if that is what is causing this error.

-Dannon
ADD COMMENT • link written 3.2 years ago by Dannon Baker ♦ 3.7k

No, i use it under docker, and i did not update anything. The only action I remember from the time was working was returning an backup of /config folder recently

ADD REPLY • link written 3.2 years ago by vebaev • 130
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