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• Profile Annotations - Choose Tables to Use Error
  I'm trying to use the Profile Annotations tool on the Galaxy Main server but when I go to select ...
• Problem With Getting The Tables Up In Profile Annotations
  Hi, I have configured and built my own galaxy server. I have set up most of the genome database...
• Profile annotation No table available
  Dear all, I have a bed file not annotated, and I would like to use the Operate on genomic interv...
• Not Able To Get Data From Ucsc Table Browser
  Hi, I'm trying to get data from UCSC table browser. However, the browser always show "Waiting fo...
• Cuffdiff -splicing analyses produced no value
  Caffdiff works fine in all area, except splicing: table produced contain no value, just "0". What...
• Problem when running read cufflinks
  getting problem the running readCufflinks(gtfFile = "Galaxy802-merged_transcripts.gtf", ...
• Questions About Column Output In Operate On Genomic Intervals -> Profile Annotations
  Hello, I tried using this tool today after inputting a bed file containing 1509 intervals of 100 ...
• Problems Accessing The Data
  Dear galaxy,                       I am not able to get the requisite output when I try the optio...
• Problem with "get data" process.
  I am following a course in coursera, called Genomic Data Science with Galaxy. The problem comes ...
• Describe Table Schema
  Tools: Get data: UCSC Main table browser: when you click on "describe table schema" button, rathe...
• Failed: Bad Request (400)
  I try to download table file 5 cols and see Failed: Bad Request (400) The same problem with anoth...
• Stringtie Deseq2/EdgeR count tables all zero
  Dear Galaxy Team, I encountered a different problem with Stringtie + output additional files for...
• Encountered message from UCSC: "Reached output limit of 100000 data values"
  Hello, I am a green hand in using Galaxy. I have got two tables from UCSC, one is about the miR...
• Tool error "Unable to run job due to a misconfiguration of the Galaxy job running system"
  When using UCSC Table tool to bring over information into Galaxy, I get the following error: Una...
• Mutliple UCSC gene names in RStudio Data Table
  Hi there, I am using the cummeRbund package in R Studio on my personal computer to analyze diffe...
• Sample name on BedCov results
  Hi, I ran BedCov on a set of samples (after using "VCFcombine" on those samples). The result is a...
• Problem Report!!
  Dear Galaxy member, I'm sending you this e-mail because of a problem I have in fetching sequence...