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• Toolshed tools for Blastn output for galaxy
  I cowrote a wrapper to run blast off the command line and now it can be executed off my galaxy in...
• HTML output issue with FastQC on a local Galaxy
  Does anyone also having problem with html output in Galaxy ? I am getting raise Exception('Un...
• HTML page output in history - no css gets loaded
  Hello, My pipeline produces an html report with links to other html pages. I have integrated thi...
• Css behavior with fastqc html report
  Hi all,  I am currently working on a our galaxy instance, when I use fastqc tool shed, the html ...
• Blast Output Visualizers in Galaxy
  Hi,  Does anyone know if there are any good blast output visualizers?  Must be able to run on t...
• How to get a .tab file with a list of mutated genes out of SNPEff in Galaxy cloud?
  How to get a .tab file with a list of mutated genes out of SNPEff in Galaxy cloud statistic HTML ...
• HTML output directory question
  I'm trying to write an xml wrapper for a script which generates an html file ("report.html") in a...
• Composite Datatypes Q.
  I have a program I'm trying to "galaxify" that emits a variable number of result files. I would l...
• Composite Datatypes Q.
  I have a program I'm trying to "galaxify" that emits a variable number of result files. I would l...
• Exporting Html With Associated Files
  Hello, I have a question regarding exporting data from Galaxy. I have written a tool which creat...
• Adding tests for unformated HTML output
  Hi, I am currently adapting version 0.11.2 of FastQC as a Galaxy tool, as we want to include it ...
• Download Contains The Html File
  Hi, I have a tool that works well. However, when I download the results, the results are zipp...
• Canvas html output
  I have installed MEME from the Galaxy toolshed in my own instance, the tool appears to run fine b...
• multiple output with html format in Galaxy Unknown parameter type (<type 'NoneType'>)
  I am trying to zip output file from my custom tool using html functionality in galaxy. When I ru...
• Access Outputs through API
  Hi , I wanted to capture the output of workflow. when i run the workflow with 2 dataset inputs of...
• Integrate pipeline chain of apps with multiple output files
  I wrote a pipeline, a set of apps in Python. Every app outputs thousands of files. Every app will...