Question: Fw: Fwd: Fw: Fw: Is Galaxy Down?
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gravatar for Laura Elnitski
12.4 years ago by
Laura Elnitski130 wrote:
Hi- thanks for your help. the message below shows another error we're getting. Normally, we'd take more time to investigate the problem before asking you, but our manuscript is out for review right now and we need resolution of this ASAP. If you think it can only be handled on our end, let me know, but if you have suggestions for the fix- we would greatly appreciate hearing them. Thanks again, Laura To: Elnitski, Laura (NIH/NHGRI) [E]; prachi@stanford.edu Cc: Wolfsberg, Tyra (NIH/NHGRI) [E]; Baxevanis, Andy (NIH/NHGRI) [E] Subject: Re: Fwd: Fw: [Galaxy-user] FW: Is Galaxy down? Hi Laura, Switched the URL so it's pointing to the correct public port. So now it's getting access to the galaxy server but now another error has developed. It looks like they must have changed the script on their end and that it's now taking different arguments. This error is out of my scope since I really don't have any expertise with the scripts on Galaxy. I think Prachi should look into this. -Lowell Server Error URL: http://g2.bx.psu.edu:8085/async/encode_db1 Module paste.exceptions.errormiddleware:*138* in |__call__| Module paste.lint:*65* in |lint_app| Module flup.middleware.session:*743* in |__call__| Module paste.recursive:*54* in |__call__| Module paste.httpexceptions:*619* in |__call__| Module paste.wsgilib:*112* in |catch_errors_app| Module galaxy.web.framework:*104* in |__call__| |<< <http: g2.bx.psu.edu:8085="" async="" encode_db1#=""> kwargs *=* trans*.*request*.*params*.*copy*(**)* kwargs*.*update*(* map *)* body *=* method*(* trans*,* ****kwargs *)* # Now figure out what we got back and try to get it to the browser in # a smart way ||>> <http: g2.bx.psu.edu:8085="" async="" encode_db1#="">body *=* method*(* trans*,* ****kwargs *)*| *exceptions.TypeError: default() takes at least 3 non-keyword arguments (2 given) *
galaxy • 1.0k views
ADD COMMENTlink modified 12.4 years ago • written 12.4 years ago by Laura Elnitski130
0
gravatar for Anton Nekrutenko
12.4 years ago by
Penn State
Anton Nekrutenko1.7k wrote:
The Encode db datasource was not loaded into running galaxy. It is corrected now and running at http://test.g2.bx.psu.edu Use this URL for testing and let us know. anton Anton Nekrutenko Assistant Professor Department of Biochemistry and Molecular Biology Center for Comparative Genomics and Bioinformatics 505 Wartik Building PennState University University Park, PA 16802 814 865-4752 814 863-6699 FAX anton@bx.psu.edu http://www.bx.psu.edu/~anton http://g2.bx.psu.edu
ADD COMMENTlink written 12.4 years ago by Anton Nekrutenko1.7k
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gravatar for Laura Elnitski
12.4 years ago by
Laura Elnitski130 wrote:
Thanks very much! Laura To: Elnitski, Laura (NIH/NHGRI) [E] Cc: galaxy-user@bx.psu.edu Subject: Re: [Galaxy-user] FW: Fwd: Fw: FW: Is Galaxy down? The Encode db datasource was not loaded into running galaxy. It is corrected now and running at http://test.g2.bx.psu.edu Use this URL for testing and let us know. anton Anton Nekrutenko Assistant Professor Department of Biochemistry and Molecular Biology Center for Comparative Genomics and Bioinformatics 505 Wartik Building PennState University University Park, PA 16802 814 865-4752 814 863-6699 FAX anton@bx.psu.edu http://www.bx.psu.edu/~anton http://g2.bx.psu.edu
ADD COMMENTlink written 12.4 years ago by Laura Elnitski130
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