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Question: Comparison of two proteomes
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gravatar for katherinesubirana
4.1 years ago by
katherinesubirana • 0
United States
katherinesubirana • 0 wrote:

Hello,

I want to know if it is possible to compare two proteomes using Galaxy, and if so, which tool to use to perform the comparison.

Thank you
galaxy • 831 views
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written 4.1 years ago by katherinesubirana • 0

Hi Katherine,

do you want to process RAW data or do you already have some protein lists?

Please also have a look at: https://usegalaxyp.org/

Bjoern

ADD REPLY • link written 4.1 years ago by Bjoern Gruening ♦ 5.1k

Hi,

I have a list of proteins with their sequences and I also have them fully characterized.

ADD REPLY • link written 4.1 years ago by katherinesubirana • 0
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gravatar for Bjoern Gruening
4.1 years ago by
Bjoern Gruening ♦ 5.1k
Germany
Bjoern Gruening ♦ 5.1k wrote:

Than I think you can use Galaxy for your analysis very easily. I can try to help you more if you have some more concrete tasks/problems to solve. But Galaxy has a lot of tools to manipulate text/tabular files. Intersecting, comparing, counting and finally plotting ... :)
ADD COMMENT • link written 4.1 years ago by Bjoern Gruening ♦ 5.1k
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