Question: Test data for cufflinks pipeline
gravatar for alejandro.0317
4.5 years ago by
alejandro.03170 wrote:

Hello everyone,

I'm currently testing  a bioinformatics environment but I'm needing some test data for test the cufflinks suite (cufflinks, cuffmerge, cuffdiff, etc). In the official web page I have found some test data (, I can test cufflinks with those data but I'm looking for some aditional test data (and possibly a tutorial) to test the rest of tools (cuffmerge, cuffdif). 

Can anyone provide me those test data? preferably a small data set.

Thanks in advance!

Cristian Alejandro Rojas

ADD COMMENTlink modified 4.5 years ago by Dannon Baker3.7k • written 4.5 years ago by alejandro.03170
gravatar for Dannon Baker
4.5 years ago by
Dannon Baker3.7k
United States
Dannon Baker3.7k wrote:

I usually use our galaxy RNA-seq tutorial to test out the pipeline.  Datasets are included, and you can find it here:

ADD COMMENTlink written 4.5 years ago by Dannon Baker3.7k
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