Question: End Position of an alignment in BWA
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zampe_pfloyd • 10 wrote:
Hi,
Does someone know if there is a way in galaxy to add a column in a dataset (for example a BWA output) that indicates the end position for each alignment ?
Alternatively, I thought I could get around that problem by measuring the length of each alignment (calculate the number of bases in the sequence column and adding it to the start position). However the character count tool in text manipulation only calculates the number of characters for the whole dataset (not a specified column on each line...).
Does someone has an idea ??
Thank you!
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modified 4.5 years ago
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Bjoern Gruening ♦ 5.1k
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4.5 years ago by
zampe_pfloyd • 10
