Question: Hg19 With Rcrs
gravatar for rabab khairat
5.4 years ago by
rabab khairat10 wrote:
Dear Galaxy,Before the new modifications, i was using hg19 human genome with the rCRS mitochondrial genome for mapping. but now i can't recognize it from the hg19 genomes in the genomes drop-down list.could you please help me, which one is with kind regards Rabab Khairat
galaxy • 1.3k views
ADD COMMENTlink modified 5.4 years ago by Jennifer Hillman Jackson25k • written 5.4 years ago by rabab khairat10
gravatar for Jennifer Hillman Jackson
5.4 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello Rabab, If you click on the pencil icon for a dataset, on the first tab's form "Attributes", the Database/Build pull-down menu has a genome listed named: Homo sapiens (hg19 with mtDNA replaced with rCRS) (Homo_sapiens_nuHg19_mtrCRS) This is also available as a built-in reference genome for most, if not all, tools on the public Main instance and can also be obtained through the rsync server for local instance use. Hopefully this helps, Jen Galaxy team -- Jennifer Hillman-Jackson Galaxy Support and Training
ADD COMMENTlink written 5.4 years ago by Jennifer Hillman Jackson25k
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