Question: Download Data Using Ftp-Access?
0
gravatar for Karen Margrethe Jessen
5.1 years ago by
Karen Margrethe Jessen20 wrote:
Is there any way of downloading processed files at galaxyproject.org by e.g. FTP, instead of “Save as” in the web browser? I have some large (~50Gb) BAM files to download, and downloading it via the browser is not stable. Thanks, Karen.
galaxy • 1.4k views
ADD COMMENTlink modified 5.1 years ago by Jennifer Hillman Jackson24k • written 5.1 years ago by Karen Margrethe Jessen20
0
gravatar for Jennifer Hillman Jackson
5.1 years ago by
United States
Jennifer Hillman Jackson24k wrote:
Hello Karen, From a shell/unix/terminal window on your side, use "curl" to download datasets. The link can be obtained by right clicking the floppy disk icon inside a history item and choosing "Copy Link Address" (for most datasets) or "Download Dataset/Download bam_index" (for BAM datasets there are two downloads). Once you have the link: $ curl -O '<link>' Hopefully this helps! Jen Galaxy team -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org
ADD COMMENTlink written 5.1 years ago by Jennifer Hillman Jackson24k
0
gravatar for Jennifer Hillman Jackson
5.1 years ago by
United States
Jennifer Hillman Jackson24k wrote:
Hi Karen, I don't run windows OS, but found this link that seems to describe the same situation with a solution. Maybe give it a try and see if it works? http://stackoverflow.com/questions/3562095/using-curl-to-get-a-https- webpage-in-windows-7 This link also looked helpful, just from a set-up perspective and since your curl install is new, but I don't know if you are using a 64-bit machine or not: https://support.gradesfirst.com/forums/20230492-how-to-setup-curl-on- windows-7-64-bit I found these with a google using "curl windows 7 https" - there are other hits, but these two looked the most promising as a first go for troubleshooting. Good luck! Jen Galaxy team -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org
ADD COMMENTlink written 5.1 years ago by Jennifer Hillman Jackson24k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 66 users visited in the last hour