thanks for help!
the error log as below:
galaxy.jobs.runners.local INFO 2009-07-13 17:30:21,924 starting
workers
galaxy.jobs.runners.local DEBUG 2009-07-13 17:30:21,945 5 workers
ready
galaxy.jobs.runners.local INFO 2009-07-13 17:30:21,950 starting
workers
galaxy.jobs.runners.local DEBUG 2009-07-13 17:30:21,969 5 workers
ready
galaxy.jobs.schedulingpolicy.roundrobin INFO 2009-07-13 17:30:21,992
RoundRobin policy: initialized
galaxy.jobs INFO 2009-07-13 17:30:21,992 job scheduler policy is
galaxy.jobs.schedulingpolicy.roundrobin:UserRoundRobin
galaxy.jobs INFO 2009-07-13 17:30:22,005 job manager started
galaxy.jobs DEBUG 2009-07-13 17:30:22,202 no runner: 326 is still in
new state, adding to the jobs queue
galaxy.jobs DEBUG 2009-07-13 17:30:22,202 no runner: 330 is still in
new state, adding to the jobs queue
Traceback (most recent call last):
File "/media/Applications/work/spring2009/galaxy/galaxy3/lib/galaxy
/web/buildapp.py", line 56, in app_factory
app = UniverseApplication( global_conf = global_conf, **kwargs
)
File "/media/Applications/work/spring2009/galaxy/galaxy3/lib/galaxy
/app.py", line 66, in __init__
self.job_manager = jobs.JobManager( self )
File "/media/Applications/work/spring2009/galaxy/galaxy3/lib/galaxy
/jobs/__init__.py", line 33, in __init__
self.job_queue = JobQueue( app, self.dispatcher )
File "/media/Applications/work/spring2009/galaxy/galaxy3/lib/galaxy
/jobs/__init__.py", line 110, in __init__
self.__check_jobs_at_startup()
File "/media/Applications/work/spring2009/galaxy/galaxy3/lib/galaxy
/jobs/__init__.py", line 127, in __check_jobs_at_startup
job_wrapper = JobWrapper( job, self.app.toolbox.tools_by_id[
job.tool_id ], self )
KeyError: u'xslt_converter_16'
Subject: Re: [galaxy-user] how to clear job queue?
To: "R" <riververy@yahoo.com>
Cc: "galaxy" <galaxy-user@bx.psu.edu>
Date: Monday, July 13, 2009, 9:36 AM
Hello,
Can you provide us with any relevant terminal output or errors?
Galaxy attempts to manage new/queued/running jobs upon startup and
should not hang or crash during this process.
--nate
•
link
written
9.4 years ago by
very • 70
