Question: How To Sort Mapped Data?
6.3 years ago by
Yan He • 240
Yan He • 240 wrote:
Hi everyone, I am working on RNA-seq data. First, I mapped the reads to the reference transcriptome using bowtie. I found some different reads mapped to the same gene with different positions. Before running Cufflinks, I would like to combine the reads that mapped to the same gene though with different positions. Is there a tool in Galaxy can fulfill this purpose? Any suggestion would be much appreciated. Thanks! Yan
ADD COMMENT • link •modified 6.3 years ago by Jennifer Hillman Jackson ♦ 25k • written 6.3 years ago by Yan He • 240