Question: Which Reference Genome Should I Select
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Du, Jianguang • 380 wrote:
Dear All,
I am going to run Tophat with mouse RNA-seq datasets. When I uploaded
the datasets with URL method, I chose "Mouse July 2007 (NCBI37/mm9)
(mm9)" under Genome. So " database: mm9" appears in the brief
description of each dataset in history.
My question is: when I run Tophat, under "Will you select a reference
genome from your history or use a built-in index?", should I selct
"Use a built-in index" or "Use one from the history" ?
Thanks.
Jianguang Du
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modified 6.3 years ago
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Jennifer Hillman Jackson ♦ 25k
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6.3 years ago by
Du, Jianguang • 380
