Question: Help With Summary Statistics
gravatar for D. A. Cowart
6.3 years ago by
D. A. Cowart30
D. A. Cowart30 wrote:
Hello, I am attempting to use Galaxy to calculate the mean sequence read length and identify the range of read lengths for my 454 data. The data has already been organized and sorted by species. The format of the data is as follows: etc...for each species I have attempted to use the "Summary Statistics" button, however it appears to only be for numerical data and not sequence data. Is this tool/task available via Galaxy? Thank you, Dominique Cowart User name: dac330
galaxy • 832 views
ADD COMMENTlink modified 6.3 years ago by Peter Cock1.4k • written 6.3 years ago by D. A. Cowart30
gravatar for Peter Cock
6.3 years ago by
Peter Cock1.4k
European Union
Peter Cock1.4k wrote:
That was probably FASTA format (but mangled in the email). Use the "Compute sequence length" tool to compute the read lengths, and then you should be able to compute some statistics about the lengths. Peter
ADD COMMENTlink written 6.3 years ago by Peter Cock1.4k
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