Question: Upgrade Script
0
Victor Ruotti • 90 wrote:
Hi,
I'm trying to use the upgrade script given that the current schema is
now version 90.
I get the following error.
Can anyone point me out, maybe there is something to do before
upgrading?
thanks in advance.
Victor
Traceback (most recent call last):
File "/opt/galaxy/galaxy-dist-original/lib/galaxy/web/buildapp.py",
line 82, in app_factory
app = UniverseApplication( global_conf = global_conf, **kwargs )
File "/opt/galaxy/galaxy-dist-original/lib/galaxy/app.py", line 32,
in __init__
create_or_verify_database( db_url, kwargs.get( 'global_conf', {}
).get( '__file__', None ), self.config.database_engine_options )
File "/opt/galaxy/galaxy-dist-
original/lib/galaxy/model/migrate/check.py", line 105, in
create_or_verify_database
% ( db_schema.version, migrate_repository.versions.latest,
config_arg ) )
Exception: Your database has version '90' but this code expects
version '79'. Please backup your database and then migrate the schema
by running 'sh manage_db.sh -c ./universe_wsgi.runner.ini upgrade'.
Removing PID file runner0.pid
sh manage_db.sh -c ./universe_wsgi.runner.ini upgrade
Traceback (most recent call last):
File "./scripts/manage_db.py", line 63, in <module>
main( repository=repo, url=db_url )
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/shell.py", line 150, in main
ret = command_func(**kwargs)
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/api.py", line 221, in upgrade
return _migrate(url, repository, version, upgrade=True, err=err,
**opts)
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/api.py", line 327, in _migrate
changeset = schema.changeset(version)
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/schema.py", line 173, in changeset
changeset = self.repository.changeset(database, start_ver,
version)
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/repository.py", line 170, in changeset
changes = [self.version(v).script(database, op) for v in versions]
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/repository.py", line 145, in version
return self.versions.version(*p, **k)
File "/opt/galaxy/galaxy-dist-original/eggs/sqlalchemy_migrate-0.5.4
-py2.6.egg/migrate/versioning/version.py", line 125, in version
return self.versions[VerNum(vernum)]
KeyError: <vernum(90)>
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•
modified 6.8 years ago
by
Greg Von Kuster ♦ 810
•
written
6.8 years ago by
Victor Ruotti • 90
