Question: Cloudman - Galaxy - Sharing Confusion
6.4 years ago by
mailing list • 840
mailing list • 840 wrote:
Hi guys, I've asked some questions about sharing an instance but it doesn't seem to be working the way I'm expecting (Unfortunately I'm also new to Amazon EC2/S3 so that may be part of my difficulty). I'm thinking maybe if I can explain what I'm trying to do, you guys could tell me the best way to do it: My End Goal: So I want to install a bioinformatics program* (and it's dependencies e.g., R, samtools, biopython, etc) that will use SGE provided by CloudMan. Then once everything is configured and installed, I want to share it with other researchers. I'm envisioning them launching Cloudman via http://biocloudcentral.herokuapp.com, having some method to get at my customizations, loading their own data via SCP and then running it. What I've Tried So Far: I created an instance of CloudMan, I chose the data cluster option on the first dialog. Then I ssh'd in and installed stuff on /mnt/galaxyData Then I clicked the share icon on the cloudman front page. (But when I look in S3 I don't think I'm seeing the programs I installed, and I'm not sure how my /mnt/galaxyData volume can be shared with the sharestring.) Let me know your thoughts. Thanks again for the help, -Greg * I'm also hoping for an easy way to update the program while keeping it shared.
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