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Question: Define A Path For The Command Files
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gravatar for Toqa Manasrah
7.0 years ago by
Toqa Manasrah • 70
Toqa Manasrah • 70 wrote:
Hi everybody, I am integrating a new tool which depends on several other libraries (part of the tool). when galaxy run my tool, it can find main command but not the deepest. where should I define the path of the libraries and command folders I need. by teh way, all these commands and libraries are copied inside the tool directory. Thank you,
galaxy • 765 views
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modified 7.0 years ago by Jennifer Hillman Jackson ♦ 25k • written 7.0 years ago by Toqa Manasrah • 70
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gravatar for Toqa Manasrah
7.0 years ago by
Toqa Manasrah • 70
Toqa Manasrah • 70 wrote:
I qouted this error message from galaxy, part of it: Could not find the main class: ConvertSegemehlIraExtended_awk. Program will exit. Unable to access jarfile vispaAssemb.jar Unable to access jarfile vispaEM.jar ________________________________ To: galaxy-dev@bx.psu.edu Cc: galaxy-user@lists.bx.psu.edu Subject: [galaxy-dev] Define a path for the command files Hi everybody, I am integrating a new tool which depends on several other libraries (part of the tool). when galaxy run my tool, it can find main command but not the deepest. where should I define the path of the libraries and command folders I need. by teh way, all these commands and libraries are copied inside the tool directory. Thank you,
ADD COMMENT • link written 7.0 years ago by Toqa Manasrah • 70
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gravatar for Jennifer Hillman Jackson
7.0 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:
closing on galaxy-user list (posted to dev, too) -- Jennifer Jackson http://usegalaxy.org http://galaxyproject.org/wiki/Support
ADD COMMENT • link written 7.0 years ago by Jennifer Hillman Jackson ♦ 25k
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