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• Exome-Capture Sequencing Analysis Tools?
  Hi Jen and other Galaxy-users, I am working on exome-capture sequencing with NGS. I am wonderi...
• Making a Pedigree file
  Hi I'm working through the Exome sequencing analysis tutorial and at one point I need to make a P...
• Does Galaxy NGS tools support targeted sequencing analysis?
  Glad to see Galaxy now provides support to do EXOME-seq analysis from FASTQ to Variant calling. K...
• Question About The Gatk Tools
  Hi, I just uploaded the BAM file for an exome sequencing sample and was trying to use the GATK t...
• Fwd: Exome Sequencing Analysis
  Hello, My name is Johnathan Cooper-Knock, I am a clinical fellow based at the University of Shef...
• Problem with bam files for exome sequencing analysis
  Hello everyone, I have one problem at the very beginning of the exome sequencing analysis, prob...
• Whole Exome Somatic Gene Mutation Extraction
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• Exome Sequence Analysis Question - using GATK Unified Genotyper
  Hi everyone, I'm tring to call SNVs and short Indels using the GATK Unified Genotyper. I have pr...
• Using FreeBayes in Exome Sequencing Analysis Tutorial
  I have been attempting to work through the Exome Sequencing Analysis tutorial available on the wi...
• Followed Exome-Seq tutorial, but Gemini Load not working
  Hello! I am performing a study with data from 80 cancer patients, half of which showed one sympt...
• Coverage for specific genes and exons
  I am using a whole exome sequencing dataset to look for potential pathogenic mutations. Overall,...
• Whole Exome Somatic Gene Mutation Extraction
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• cannot find picard tool
  Hello, We had used a picard tool for exome target metris ... But i don't find this tool now ? Wh...
• HOW can select MAF <0,01 in a VCF files without use ANNOVAR?
  HOW can select variations with MAF &lt;0,01 in a VCF files without use ANNOVAR? I have problem wi...
• Whole Exome Sequencing
  I recently got on a project that is attempting to find novel mutations in certain diseases by com...
• Merging Of Illumina Paired End Files
  I have 3 illumina paired end reads of exome capture of the sample. I want to assemble these reads...