Question: Thanks From Di Nguyen. U Of Washington
0
Jennifer Hillman Jackson ♦ 25k wrote:
Hello Di,
Both Bowtie and Tophat will map sequences, with Tophat being preferred
for RNA-seq data. If you wish to do downstream analysis, then using
the
Cuff* tools would be the next steps. Each of these tools has an
associated help description that explains the inputs/outputs.
Thanks for using Galaxy,
Jen
Galaxy team
ps. Please send all questions directly to the mailing lists unless
they
contain private data/links.
--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/Support