Question: Error in docker when using smtp_server
gravatar for gb
10 weeks ago by
gb60 wrote:

I am running galaxy in docker which is working. But when I configure the smtp server it gives the following error:

The -s/--socket option is missing and stdin is not a socket.

As smtp_server I use

Is some one familiar with this error? And has it to do with docker or galaxy?


smtp docker • 137 views
ADD COMMENTlink modified 10 weeks ago by Jennifer Hillman Jackson25k • written 10 weeks ago by gb60
gravatar for Jennifer Hillman Jackson
10 weeks ago by
United States
Jennifer Hillman Jackson25k wrote:


The error is likely a problem with the uWSGI install/version/setup.

Double check that your configuration set up as described in the Galaxy Docs:

This is the admin training for setting up SMTP (it is not configured in Docker Galaxy by default as far as I know):

For reference, this is the default configuration for Docker Galaxy:

I also asked the developers for more feedback to find out of there is something special about docker and this configuration at Gitter, please follow the replies and/or comment at Gitter. They also may post back here.

Thanks! Jen, Galaxy team

ADD COMMENTlink modified 10 weeks ago • written 10 weeks ago by Jennifer Hillman Jackson25k

Thanks for the response, I will try to run galaxy outside docker to check if it is a docker or galaxy thing. Think it is better to rule that out first.

ADD REPLYlink written 10 weeks ago by gb60

I will come back to this later if other people also run into this, got other things to work on so this needed to wait.

ADD REPLYlink written 8 weeks ago by gb60
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