Question: Trimmomatic and Trim Galore are not working.
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gravatar for j_olliff
5 days ago by
j_olliff0
j_olliff0 wrote:

I am performing an RNA-seq and am trying to trim adapter sequences with Trim Galore. When I made a flat collection, Trim Galore worked, but when I made a paired-end collection with the same data, Trim Galore turned into red boxes without an error message. I tried to use Trimmomatic instead, but the same thing happened. I then tried to use Trim Galore on the sequences individually, and the red boxes appeared again, as well as when I tried to use Trimmomatic on individual files.

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