I am in the process of analyzing some RNAseq data. I uploaded the data and successfully mapped the sequences to the the C. elegans genome using the HISAT2 program. Currently I am trying to convert my map reads to gene counts using the htseq-count program but keep encountering a fatal error: Fatal error: Unknown error occured Error occured when processing GFF file (line 4 of file /galaxy-repl/main/files/024/011/dataset_24011093.dat): Failure parsing GFF attribute line [Exception type: ValueError, raised in __init__.py:164]
Is there a way to bypass this or keep it from happening?
Thank you so much,