I am trying to aggregate results from FAST Qc lists by MultiQC, but MUltiQC isnt recognizing the list . I have tried to verify the accepted format (txt), but to no avail. Also, Trimmomatic is throwing up error message (but still works).
I have multiple bam files from single cell RNA-Seq data data analysis, will mergigng all these bam files will be helpful in downstream processing? (for the creation of an expression matrix) Any suggestions will be helpful. Thanks.