Question: Problems running Deseq2 jobs
0
gravatar for p.barnett
15 days ago by
p.barnett20
p.barnett20 wrote:

For the past 24 hours I have been trying to run DEseq2 jobs on the main server usegalaxy.org), but with no success (message reads, 'there is no package getopt'). Other jobs, such as features count, have successfully run. Server status says ok, I also tried rerunning jobs that ran fine 2 days ago, but these also now fail..... is this a temporary problem ?

ADD COMMENTlink modified 15 days ago by Jennifer Hillman Jackson24k • written 15 days ago by p.barnett20

I had the same problem, got the same "fatal error". The same thing happened even when I re-run the old successful finished Deseq2 jobs.

ADD REPLYlink written 15 days ago by wei.wang0
0
gravatar for Jennifer Hillman Jackson
15 days ago by
United States
Jennifer Hillman Jackson24k wrote:

Hello,

The public Main Galaxy server at https://usegalaxy.org is presenting with job errors across many tools at this time. We are actively working to correct the issues.

Please follow this ticket for updates: https://biostar.usegalaxy.org/p/26580/

Once the server is corrected, retest your specific issue and comment here in your original post if the problems persist and we can troubleshoot the use case.

Thanks! Jen, Galaxy team

ADD COMMENTlink modified 15 days ago • written 15 days ago by Jennifer Hillman Jackson24k
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