The cutadapt tool available in the galaxy tool shed only allows for the manual input of the adapter sequence, or picking an adapter sequence from the drop down menu one at a time controlled by tab delimited text file. Does anyone have access to a modified wrapper that would allow for using an adapter.fasta file for the list of adapters similar to the command line version? I am putting together a workflow using galaxy and this is the only step we have to do manually. Since we have to trim over 150 adapters from our reads in both 5’ and 3’ having the adapter input file option will be extraordinarily helpful. Any help would be greatly appreciated.