Question: Query in uploading data in stringtie
0
gravatar for sinha.puja
4 months ago by
sinha.puja0
sinha.puja0 wrote:

When I am using stringtie in galaxy, the one option is Reference annotation to use for guiding the assembly process so how to upload gtf reference annotation in the column. However I have downloaded the human gtf file from ensemble and it also showed in my history in galaxy but the column in stringtie shows no gtf data set available.

galaxy • 113 views
ADD COMMENTlink modified 4 months ago by Jennifer Hillman Jackson23k • written 4 months ago by sinha.puja0
0
gravatar for Jennifer Hillman Jackson
4 months ago by
United States
Jennifer Hillman Jackson23k wrote:

Hello,

Try assigning the datatype gtf to the reference annotation dataset in your history. This is how:

Thanks! Jen, Galaxy team

ADD COMMENTlink written 4 months ago by Jennifer Hillman Jackson23k
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