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Question: Bets practice for updating Galaxy server (15.10 -> 17.05)
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gravatar for David Kovalic
15 months ago by
David Kovalic • 0
St. Louis, MO
David Kovalic • 0 wrote:

Hi,

We have a galaxy instance which we would like to update from v15.10 to the most current version.

Is there a best practice document for server upgrades? Can we go directly from 15.10 to 17.05 or do we need to update through intermediate version(s)?

Any help or similar experiences would be appreciated.

Thanks,

David
server • 299 views
ADD COMMENT • link •
modified 15 months ago by Jennifer Hillman Jackson ♦ 25k • written 15 months ago by David Kovalic • 0
0
gravatar for Jennifer Hillman Jackson
15 months ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hi David,

Directly upgrading from an original git checkout with a git update should be fine. New configuration options have been introduced, so be sure to review the intermediate release notes addressing admin changes and adjust/define new options as needed. Saving back a copy of your original config files (at a minimum) before doing the upgrade would be recommended in case some issue does come up.

Once Galaxy is upgraded next update your tools to the latest versions. Many now have conda dependency management plus bug/usage fixes and updates. These new tool versions work best in the latest release.

https://docs.galaxyproject.org/en/master/releases/

Hope this helps! Jen, Galaxy team
ADD COMMENT • link written 15 months ago by Jennifer Hillman Jackson ♦ 25k

Awesome, thanks Jen!

ADD REPLY • link written 15 months ago by David Kovalic • 0
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