Hi, I have used Tophat2 and cuffdiff to analyze the S.cerevisiae RNA-seq data. But the rRNA FPKM values produced by cuffdiff all are zero although there are many reads that mapped to the rRNA locus. Could you please tell me the possible reason of this? Thank you very much, Best wishes, Siyu
Heads up! This is a static archive of our support site. Please go to help.galaxyproject.org if you want to reach the Galaxy community. If you want to search this archive visit the Galaxy Hub search
Question: rRNA FPKM values all are zero
17 months ago by
xusisiyu • 0
xusisiyu • 0 wrote:
ADD COMMENT • link •
16 months ago by
Jennifer Hillman Jackson ♦ 25k
Jennifer Hillman Jackson ♦ 25k wrote:
Check the "Test status" field of the output. This will inform about what the underlying problem is with the data.
Thanks, Jen, Galaxy team
ADD COMMENT • link
Please log in to add an answer.
Powered by Biostar version 16.09
Traffic: 169 users visited in the last hour