Filter Tool

Question: Filter Tool

7.6 years ago by

Jeremy Goecks • 2.2k wrote:

(Starting new thread on galaxy-user.) Jagat, It depends what filter tool you're using and what dataset you're filtering. There is a generic filter tool that can be used to filter Cuffdiff tabular files for either FPKM values and differential expression tests. There is also a tool for filtering GTF files based on a Cuffdiff expr dataset. It sounds like you may be confusing either the tools or the inputs. If after double-checking you're still having problems with filtering, please put together a short list of your analysis steps and share your history with me, and I can take a look. Thanks, J.

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modified 7.6 years ago by shamsher jagat • 590 • written 7.6 years ago by Jeremy Goecks • 2.2k

7.6 years ago by

shamsher jagat • 590

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shamsher jagat • 590 wrote:

I have shared the history with you Jeremy and has named the files accordingly. I still have same problem and file can not be uploaded to UCSC genome browser by clicking icon of browser on Galaxy. Thanks

ADD COMMENT • link written 7.6 years ago by shamsher jagat • 590

7.6 years ago by

Jeremy Goecks • 2.2k

Jeremy Goecks • 2.2k wrote:

Can you please be specific about the problems that you're having and the datasets that exhibit these problems? Thanks, J.

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