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Question: How to install Pilon manually? It does not go via a toolshed.
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gravatar for msprindzhuk
21 months ago by
msprindzhuk • 50
msprindzhuk • 50 wrote:

How to install Pilon manually? It does not go via a toolshed..........................................
pilon • 746 views
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modified 21 months ago by Martin Čech ♦♦ 4.9k • written 21 months ago by msprindzhuk • 50
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gravatar for Martin Čech
21 months ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

Pilon is installable via Tool Shed using this repository: https://toolshed.g2.bx.psu.edu/view/iuc/pilon/fe0dc27e6327 and corresponding Conda package from bioconda channel.

If you are new to using Galaxy with Conda please read through https://docs.galaxyproject.org/en/master/admin/conda_faq.html

TLDR: It should install without a problem on Galaxy >17.01 and on some older ones if you properly configure Conda.
ADD COMMENT • link written 21 months ago by Martin Čech ♦♦ 4.9k
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