I am having trouble with htseq-count. My gff file i.e. brassica juncea .gff file does not contain exon feature. How to run htseq? it is giving me error
The error message is cant find the gene_id/gene_name
I've replied to this on the main biostars site.
I am also having trouble using gff3 file of salmo salar from ncbi. HTSeq gives error all the time kindly advise how can I fix it
What's the error message?