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Question: Data Sets - good or not
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gravatar for cgard2
24 months ago by
cgard2 • 10
cgard2 • 10 wrote:

By looking at the Summary after running the data sets through NGS: QC and manipulation - FastQC Read Quality report - how do you know if your data sets are good or not?

galaxy • 362 views
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modified 24 months ago by Bjoern Gruening ♦ 5.1k • written 24 months ago by cgard2 • 10
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gravatar for Bjoern Gruening
24 months ago by
Bjoern Gruening ♦ 5.1k
Germany
Bjoern Gruening ♦ 5.1k wrote:

This is not so easy. Please have a look at available documentation, for example here:

or here:

https://vimeo.com/search?q=fastqc

Also keep in mind that these reports are very specific to the kind of input data you have. RNA-Seq FASTQC reports can look very different and be even red, nevertheless this can be expected.

Ciao, Bjoern
ADD COMMENT • link modified 24 months ago • written 24 months ago by Bjoern Gruening ♦ 5.1k
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