Question: Galaxy - conditional statement problem in workflow
gravatar for berengereB
2.4 years ago by
berengereB0 wrote:


I'm trying to finalise a workflow on Galaxy. The tools works but I have some conditional statements and it didn't work in the workflow. I mean, these parameters aren't alterable in the workflow, Galaxy doesn't recognise them.

I saw this was a recurrent problem with conditional loops in workflows since several year, but is there a solution to get around this problem know ?


workflow galaxy • 649 views
ADD COMMENTlink written 2.4 years ago by berengereB0

Can you please clarify. Galaxy workflows do not support conditionals as far as I know. What are you trying to do exactly?

ADD REPLYlink written 2.4 years ago by Peter van Heusden150

Sorry, I have implemented several tools on Galaxy that contains some conditional statements. I also created a workflow for them, but when I need to run it, all parameters in a conditional statement are hidden (they doesn't pass in the workflow). I don't know if I'm clear. The result is that I can't change the parameters which implies those conditional statements.

It's a big problem, and I would like to know if there is a way to skirt that.


ADD REPLYlink written 2.4 years ago by berengereB0
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