Question: Using dataset collection on workflow that runs through the API
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gravatar for nasos.tsoukalas
2.7 years ago by
nasos.tsoukalas0 wrote:

Hi,

I am running a workflow through the API, using the "workflow_id" and "ds_map" to map inputs to datasets.

I want to input a dataset collection now to a workflow that can take multiple inputs (and works when run outside the API by using a dataset collection created in history)

How do i setup the ds_map for this ? The "hdca" is not an option for ds_map by the below link: http://galaxy.readthedocs.org/en/master/_modules/galaxy/webapps/galaxy/api/workflows.html

The workflow is not in history, so i cannot use the other options like "from_history_id".

Also the dataset collection should be created in the API, how can this be done ?

Thanks in advance

Nasos

ADD COMMENTlink written 2.7 years ago by nasos.tsoukalas0
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