Hi all, I'm trying to use MACS2 on galaxy. It was installed on our local instance via the toolshed.
When "MACS2 callpeak" is invoked, there's a call to Rscript
## run R to create pdf from model script #if $nomodel_type.nomodel_type_selector == 'create_model' and 'pdf' in str($outputs).split(','): && Rscript MACS2_model.r > MACS2_model.r.log #end if
But I get an error from Galaxy because there is no file MACS2_model.r anywhere (
find / -type f -name "MACS2_model.r")
Any idea ?