Question: len file/entry failure for custom builds
0
gravatar for zsmith
3.5 years ago by
zsmith • 10
United States
zsmith • 10 wrote:

Hello,

I've been trying to load either a .len file or do a manual length entry for a custom build, and I keep getting the following error message:

objectstore,_call_method failed: get_filename on , kwargs:{}

Is this a bug? I've failed on two different custom builds now and I would like to know what is happening.

 

Zach Smith

software error • 960 views
ADD COMMENT • link • modified 3.4 years ago by Jennifer Hillman Jackson ♦ 25k • written 3.5 years ago by zsmith • 10

Hi Zach, Where are you using Galaxy? (URL for public is this your own local/cloud). Thanks, Jen, Galaxy team

ADD REPLY • link modified 3.5 years ago • written 3.5 years ago by Jennifer Hillman Jackson ♦ 25k

Hi Jennifer,

Using Galaxy Main (public)

Zach

From: Jennifer Hillman Jackson on Galaxy Biostar [mailto:notifications@biostars.org] Sent: Wednesday, June 17, 2015 4:17 PM To: Smith, Zach (Zachary) Subject: [galaxy-biostar] C: len file/entry failure for custom builds

Activity on a post you are following on Galaxy Biostar<http: biostar.usegalaxy.org="">

User Jennifer Hillman Jackson<http: biostar.usegalaxy.org="" u="" 254=""/> wrote Comment: len file/entry failure for custom builds<http: biostar.usegalaxy.org="" p="" 12710="" #12728="">:

Hi Zach, Where are you using Galaxy? (URL for public or your own local/cloud). Thanks, Jen, Galaxy team

ADD REPLY • link written 3.5 years ago by zsmith • 10

OK, thanks. I will give this some testing right now to ensure there is not a global issue. If that passes, then the issue is most likely the format of the .len file input. Extra spaces/tabs/empty lines will be problematic, if you want to troubleshoot that while I am testing. Jen

ADD REPLY • link written 3.5 years ago by Jennifer Hillman Jackson ♦ 25k

Hello,

I have confirmed that this is an issue. Our team will be looking into the root cause/solution as a priority. We will post back here once resolved.

Thank you for reporting the issue!

Jen, Galaxy team

ADD REPLY • link written 3.5 years ago by Jennifer Hillman Jackson ♦ 25k
0
gravatar for Jennifer Hillman Jackson
3.4 years ago by
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

This is now an open issue on http://usegalaxy.org.

To follow progress on the resolution, please see this Github issues ticket: https://github.com/galaxyproject/galaxy/issues/375

Best, Jen, Galaxy team

ADD COMMENT • link written 3.4 years ago by Jennifer Hillman Jackson ♦ 25k
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