Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Forum
Planet
All »
Home
Log In
Question: When you go into galaxy main page, under tools/getdata, epigraph server is missing.
0
gravatar for krishnamboori
3.5 years ago by
krishnamboori • 0
United States
krishnamboori • 0 wrote:

Hello,

       When you go into galaxy main page, under tools/getdata, epigraph server is missing. may i know what must be done to access epigraph server? thanks.

Sanjay Kumar
epigraph • 730 views
ADD COMMENT • link •
modified 3.5 years ago by Jennifer Hillman Jackson ♦ 25k • written 3.5 years ago by krishnamboori • 0
0
gravatar for Jennifer Hillman Jackson
3.5 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hello,

Are you certain that you were using http://usegalaxy.org when accessing this tool previously? Here is a list of other public Galaxy servers. If you were using one of these, or perhaps a local that you have access to, then contacting them directly about server issues is the best path.

Alternatively, if you are simply checking to see if the tool has been wrapped for Galaxy, then I do not believe it has, or at least not publically in the Main Tool Shed (for use in a local or cloud Galaxy). If I am wrong, we'll post a correction.

UPDATE: Perhaps this is the publication you are referencing? Web-based analysis of (Epi-) genome data using EpiGRAPH and Galaxy. The tool was once integrated on http://usegalaxy.org, but that was several years ago (around 2010), and it is no longer supported.

Thanks, Jen, Galaxy team
ADD COMMENT • link modified 3.5 years ago • written 3.5 years ago by Jennifer Hillman Jackson ♦ 25k

the only mention of epigraph in Galaxy code is this one: 
https://github.com/galaxyproject/galaxy/blob/6b8d4bfbe1250976b8c751a301addeb1aba4cff4/lib/galaxy/tools/actions/__init__.py#L441

in biostar: Sending Data To Gbrowse

 

ADD REPLY • link modified 3.5 years ago • written 3.5 years ago by Martin Čech ♦♦ 4.9k
Please log in to add an answer.

Similar posts • Search »

Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 173 users visited in the last hour