Question: When you go into galaxy main page, under tools/getdata, epigraph server is missing.
0
gravatar for krishnamboori
3.5 years ago by
United States
krishnamboori0 wrote:

Hello,

       When you go into galaxy main page, under tools/getdata, epigraph server is missing. may i know what must be done to access epigraph server? thanks.

Sanjay Kumar

epigraph • 730 views
ADD COMMENTlink modified 3.5 years ago by Jennifer Hillman Jackson25k • written 3.5 years ago by krishnamboori0
0
gravatar for Jennifer Hillman Jackson
3.5 years ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

Are you certain that you were using http://usegalaxy.org when accessing this tool previously? Here is a list of other public Galaxy servers. If you were using one of these, or perhaps a local that you have access to, then contacting them directly about server issues is the best path.

Alternatively, if you are simply checking to see if the tool has been wrapped for Galaxy, then I do not believe it has, or at least not publically in the Main Tool Shed (for use in a local or cloud Galaxy). If I am wrong, we'll post a correction.

UPDATE: Perhaps this is the publication you are referencing? Web-based analysis of (Epi-) genome data using EpiGRAPH and Galaxy. The tool was once integrated on http://usegalaxy.org, but that was several years ago (around 2010), and it is no longer supported.

Thanks, Jen, Galaxy team

ADD COMMENTlink modified 3.5 years ago • written 3.5 years ago by Jennifer Hillman Jackson25k

the only mention of epigraph in Galaxy code is this one: 
https://github.com/galaxyproject/galaxy/blob/6b8d4bfbe1250976b8c751a301addeb1aba4cff4/lib/galaxy/tools/actions/__init__.py#L441

in biostar: Sending Data To Gbrowse

 

ADD REPLYlink modified 3.5 years ago • written 3.5 years ago by Martin Čech ♦♦ 4.9k
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