Question: Clipping adapter from 3' end of only 1 of 2 paired end reads
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amy.klegarth • 0 wrote:
Hi all,
I cropped barcodes a long while back in a lab where I had CLC Genomics - now that I'm in a different lab I'd like to do some reprocessing of my files and when the barcodes were originally cropped I failed to remove a partial adapter of CGG from the 3' end of all my >filename/2 reads but not my >filename/1 reads.
Is there a way to use the clip or trim features to only take off the first three basepairs of the combined reads file, or do I need to split the fastq and then trim?
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modified 3.6 years ago
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Jennifer Hillman Jackson ♦ 25k
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3.6 years ago by
amy.klegarth • 0
