Question: Read Quality Distribution
gravatar for mehedihasanounto
4.0 years ago by
mehedihasanounto0 wrote:


  • A version of FastQC can be downloaded here and run locally on any operating system with a suitable Java Runtime Environment (JRE) installed.

  • An online version of FastQC is also available here in the "Andromeda" Galaxy instance.

Given: A quality threshold, along with FASTQ entries for multiple reads.

Return: The number of reads whose average quality is below the threshold.




fastqc • 819 views
ADD COMMENTlink modified 4.0 years ago by Jennifer Hillman Jackson25k • written 4.0 years ago by mehedihasanounto0
gravatar for Jennifer Hillman Jackson
4.0 years ago by
United States
Jennifer Hillman Jackson25k wrote:


It is not clear what your question is. Would you be able to restate it? If it is a problem with that particular Galaxy instance, it would be best to contact them directly if it appears to be a tool error. User support contact info is on the home page (of nearly any public Galaxy), or you can find it here for this one:

Thanks, Jen, Galaxy team

ADD COMMENTlink written 4.0 years ago by Jennifer Hillman Jackson25k
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