Clean galaxy install differs from Galaxy hg update

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Question: Clean galaxy install differs from Galaxy hg update

4.1 years ago by

jasperkoehorst • 10

Netherlands

jasperkoehorst • 10 wrote:

Hello,

I just did a clean install on a standalone machine of galaxy. Now I noticed that all the configuration files and such are in the config folder which is nicer in many ways. But when I update my server to the latest HG version the config folder is empty and all documents are in the main folder.

Is there a way to perform a clean pull from the galaxy repository while maintaining the datasets and histories and such?

Thanks

update galaxy • 1.1k views

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modified 4.1 years ago by Dannon Baker ♦ 3.7k • written 4.1 years ago by jasperkoehorst • 10

4.1 years ago by

Dannon Baker ♦ 3.7k

United States

Dannon Baker ♦ 3.7k wrote:

We worked to make sure that there's a smooth migration path and you should be able to update normally on old distributions. There is configuration resolution code in place that will automatically use the config files in the old locations if they exist, or the new locations if they do not. You can always move the non .sample versions of files you've modified into config to match the new directory structure. I believe the only one that changed name is universe_wsgi.ini being renamed to galaxy.ini.

ADD COMMENT • link written 4.1 years ago by Dannon Baker ♦ 3.7k

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