Question: (Closed) BWA - [Errno 28] No space left on device
1
gravatar for zampe_pfloyd
4.5 years ago by
zampe_pfloyd • 10
Canada
zampe_pfloyd • 10 wrote:

I get the following error using BWA :

Error moving output file before removing headers. [Errno 28] No space left on device. 

Curiously it always happens with the same dataset. Running the same BWA with other datasets of the same size does not give this error.. All of the datasets come from the same Hiseq experiment and were treated the same.

How do I get raound this error ?

 

Thank you,

 

bwa software error • 2.2k views
ADD COMMENT • link • modified 4.5 years ago by Nate Coraor ♦ 3.2k • written 4.5 years ago by zampe_pfloyd • 10

Hello zampe_pfloyd!

Fully answered. Closing.

Cheers!

ADD REPLY • link modified 4.5 years ago • written 4.5 years ago by Martin Čech ♦♦ 4.9k
1
gravatar for Nate Coraor
4.5 years ago by
Nate Coraor ♦ 3.2k
United States
Nate Coraor ♦ 3.2k wrote:

One of the cluster nodes used to run jobs of this type had a full /tmp filesystem. This has been fixed. Sorry for the inconvenience.

ADD COMMENT • link written 4.5 years ago by Nate Coraor ♦ 3.2k
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