Question: Cufflinks-Status-Fail
gravatar for dongdong zhaoweiming
7.0 years ago by
dongdong zhaoweiming110 wrote:
Hi,   I used the cufflinks to assemble my SAM file, but the results showed some CUFF's status in not "OK",it's FAIL, so that means these CUFF's corresponding sequence  could not used or else mean? Thanks a lot!   Reards weimin zhao
rna-seq cufflinks • 1.1k views
ADD COMMENTlink modified 7.0 years ago by Jennifer Hillman Jackson25k • written 7.0 years ago by dongdong zhaoweiming110
gravatar for Jennifer Hillman Jackson
7.0 years ago by
United States
Jennifer Hillman Jackson25k wrote:
Hello Weimin, The majority of issues user's encounter with RNA-seq tools is related to the inputs, so troubleshooting format is the first step. Please see the section "Example: unexpected results with RNA-seq analysis tools" here: However, if after reviewing, you think that there may be a problem with the Cufflinks tool itself as wrapped in Galaxy, please send a bug report from the failed dataset as explained here: Hopefully this helps, Best, Jen Galaxy team -- Jennifer Jackson
ADD COMMENTlink written 7.0 years ago by Jennifer Hillman Jackson25k
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