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Question: ERROR+HELP+URGENT: vcffilter removed. Why? Put it back please
1
gravatar for stephen.j.newhouse
8 months ago by
stephen.j.newhouse • 10
stephen.j.newhouse • 10 wrote:

Hi

I teach galaxy to medics and more, and have set them an assessment (deadline is 1st week April) using a galaxy workflow we constructed a month ago.

the workflow uses VCFfilter and now it seems this has bee removed from usegalaxy.org. Please can you put it back.

Its about to cause a lot of undue stress for a lot of students using galaxy that had struggled with galaxy in the past.

Best

Steve
vcffilter usegalaxy.org vcf filter galaxy • 291 views
ADD COMMENT • link •
modified 8 months ago • written 8 months ago by stephen.j.newhouse • 10

VCF tool updates are in progress -- should be back very soon. More feedback Monday about status.

Jen, Galaxy team

ADD REPLY • link written 8 months ago by Jennifer Hillman Jackson ♦ 25k

Hi Great stuff - thanks to all galaxy folks that worked on this! S

ADD REPLY • link written 8 months ago by stephen.j.newhouse • 10
1
gravatar for Martin Čech
8 months ago by
Martin Čech ♦♦ 4.9k
United States
Martin Čech ♦♦ 4.9k wrote:

The new version of the vcffilter tool is available. It behaves a bit different so you might need to adjust your workflows. https://usegalaxy.org/root?tool_id=toolshed.g2.bx.psu.edu/repos/devteam/vcffilter/vcffilter2/1.0.0_rc1+galaxy1
ADD COMMENT • link written 8 months ago by Martin Čech ♦♦ 4.9k
0
gravatar for stephen.j.newhouse
8 months ago by
stephen.j.newhouse • 10
stephen.j.newhouse • 10 wrote:

This all works just fine! Thanks all S
ADD COMMENT • link written 8 months ago by stephen.j.newhouse • 10
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