Hello, I need help you. I have a file of CHIP-SEQ data in BED format and i analyzed those data with IGV ("manually") and with Galaxy at the same time, resulting in a list of genes corresponding to my peaks.
Now, I would obtain more information: I would know if the peaks on my file.bed interest the exon, intron or promoter region of the corresponding gene and I would do it with galaxy.
I hope to explain well my question. How can I do it?