Question: Sequence logo from a text file?
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gravatar for o3964fn4n
13 months ago by
o3964fn4n0
o3964fn4n0 wrote:

Hi,

I have a text file with results from a screen. I know that "The identifiers in the file are from the hg38 GENCODE V24 basic annotation (table:wgEncodeGencodeBasicV24)"

I then have to make a sequence logo based on the first 15 positions in the transcripts that were found to be significant hits in the screen.

I know that I have to use Galaxy to make a sequence logo, but how do I get my information into galaxy? Do I use my original text file or do I get data from galaxy? Because my file is a txt.file and when making a sequence logo you have to use a fasta file

Thanks in advance.

pssm ucsc sequence logo galaxy • 303 views
ADD COMMENTlink written 13 months ago by o3964fn4n0
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