Question: How to track status of galaxy job until it becomes 'error' or 'ok' from status 'new'
0
gravatar for isha.nagpal
12 days ago by
isha.nagpal0 wrote:

I am running my own galaxy server. So when i start a job, I would like to notify user as soon as it finishes. How to continuously keep track of job status in galaxy. I am using python.

status job galaxy • 36 views
ADD COMMENTlink modified 11 days ago by Jennifer Hillman Jackson21k • written 12 days ago by isha.nagpal0
0
gravatar for Jennifer Hillman Jackson
11 days ago by
United States
Jennifer Hillman Jackson21k wrote:

Hello,

Have your users run the jobs with a workflow. Per-tool, in the right panel where job configuration is set up, there is an option to send an email once the job completes. The email is sent to the registered user's email address.

With the right email settings (in whatever client you are using), should you be running the job/workflow, you can set it up so that these emails forward.

Or, share or publish the workflow (and possibly a history with the inputs - or put these into a public Data library) then have the user's run the workflow themselves. As admin, you can always go into their accounts and take a look at thier contents for troubleshooting/help/feedback (Admin > Impersonate a user).

Hope this helps! Jen, Galaxy team

ADD COMMENTlink modified 11 days ago • written 11 days ago by Jennifer Hillman Jackson21k
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