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Question: Tool to join a collection of tab-delimeted files on a given column
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gravatar for Lance Parsons
2.2 years ago by
Lance Parsons • 110
United States
Lance Parsons • 110 wrote:

Does anyone know of a tool/workflow that would "join" or "paste" a collection (list) of tab delimited files (htseq-count output) into a single table? Ideally, joining the files on the first column and pasting the second column of each file into a table... I'm sure I could write such a thing, but wondered if one already existed.
table join collections htseq-count • 484 views
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modified 2.2 years ago by Devon Ryan • 1.9k • written 2.2 years ago by Lance Parsons • 110
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gravatar for Devon Ryan
2.2 years ago by
Devon Ryan • 1.9k
Germany
Devon Ryan • 1.9k wrote:

It's the "join two datasets" tool, which would need to be run multiple times. Presuming you wanted to use DESeq2 then there's no need to do this.
ADD COMMENT • link written 2.2 years ago by Devon Ryan • 1.9k

Thanks, running multiple times is exactly what I'd like to avoid. And no, this would be for other downstream purposes, not DESeq2.

ADD REPLY • link written 2.2 years ago by Lance Parsons • 110
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