Question: sra dataset in galaxy
gravatar for 1603.neha
23 months ago by
1603.neha70 wrote:

how to make sra dataset in galaxy for analysis.please help me i am highly confused how to use the get data-ebi sra link gets you out of the galaxy . dont know how to use it

rna-seq assembly • 610 views
ADD COMMENTlink modified 23 months ago by Hotz, Hans-Rudolf1.7k • written 23 months ago by 1603.neha70
gravatar for Hotz, Hans-Rudolf
23 months ago by
Hotz, Hans-Rudolf1.7k wrote:


It only looks like you are out of Galaxy. Any selected fastq files will become a Galaxy History item. For example:

search for "ERA007448"

click on "ERA007448" (below "Submission (Read/Analysis) (1 results found)")

you get a big table, where one column is called: "Fastq files (galaxy)".

click on one files in this column, and you will get the Galaxy interface again, and the selected file will become your next History item (be patient, depending on the size of the selected file, it will take a while)

Hope this helps, Hans-Rudolf

ADD COMMENTlink written 23 months ago by Hotz, Hans-Rudolf1.7k
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