This is a static archive of our support site. Please go to help.galaxyproject.org
if you want to reach the Galaxy community. If you want to search this archive visit the Galaxy Hub search
Question: Bam datasets to filter
I need to filter bam dataset on 2 conditions
More than 20
Properly paired reads true
2.7 years ago by
Try the tool NGS: SAMtools > Filter SAM or BAM, output SAM or BAM files on FLAG MAPQ RG LN or by region.
Thanks, Jen, Galaxy team
Please log in
to add an answer.
Traffic: 169 users visited in the last hour